Package: MixTwice 2.0

MixTwice: Large-Scale Hypothesis Testing by Variance Mixing

Implements large-scale hypothesis testing by variance mixing. It takes two statistics per testing unit -- an estimated effect and its associated squared standard error -- and fits a nonparametric, shape-constrained mixture separately on two latent parameters. It reports local false discovery rates (lfdr) and local false sign rates (lfsr). Manuscript describing algorithm of MixTwice: Zheng et al(2021) <doi:10.1093/bioinformatics/btab162>.

Authors:Zihao Zheng and Michael A.Newton

MixTwice_2.0.tar.gz
MixTwice_2.0.zip(r-4.7)MixTwice_2.0.zip(r-4.6)MixTwice_2.0.zip(r-4.5)
MixTwice_2.0.tgz(r-4.6-any)MixTwice_2.0.tgz(r-4.5-any)
MixTwice_2.0.tar.gz(r-4.7-any)MixTwice_2.0.tar.gz(r-4.6-any)
MixTwice_2.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
MixTwice/json (API)

# Install 'MixTwice' in R:
install.packages('MixTwice', repos = c('https://zzheng68.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.00 score 1 scripts 220 downloads 1 mentions 1 exports 15 dependencies

Last updated from:f31a2993c7. Checks:7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64NOTE104
source / vignettesOK137
linux-release-x86_64NOTE100
macos-release-arm64NOTE150
macos-oldrel-arm64NOTE163
windows-develNOTE103
windows-releaseNOTE79
windows-oldrelNOTE64
wasm-releaseOK91

Exports:mixtwice

Dependencies:alabamaashretrunctfdrtoolinvgammairlbaIsolatticeMatrixmixsqpnumDerivRcppRcppArmadilloSQUAREMtruncnorm